Obsidian vs Notion in 2025: Which Is Best for Your Markdown Workflow?
The two giants of personal knowledge management—Obsidian and Notion—serve different needs. If you’re trying to decide where to store your notes, research, and web content, this comparison will help you choose.
The Fundamental Difference
Obsidian stores everything as local Markdown files. You own your data completely.
Notion stores everything in the cloud using a proprietary block format. You get collaboration and databases.
This single difference drives almost every other distinction.
Markdown: Native vs. Supported
Obsidian
Obsidian is Markdown. Every note is a .md file on your computer:
- Edit with any text editor
- Sync via your preferred method (Git, Dropbox, iCloud)
- Transfer to other apps instantly
- Future-proof—Markdown has existed since 2004
When you save web content as Markdown, it drops directly into your vault and works immediately.
Notion
Notion supports Markdown but uses a proprietary block format internally:
- Import Markdown, but it converts to blocks
- Export Markdown, but with Notion-specific formatting
- No direct file access
- Locked into Notion’s ecosystem
Importing Markdown works, but you lose some fidelity. Exporting creates files with UUIDs and non-standard syntax.
Importing Web Content
To Obsidian
- Save webpage as Markdown with Save
- Move file to your vault folder
- Done — it’s immediately available
Or use Obsidian’s built-in “Import” feature to drag and drop Markdown files.
To Notion
- Save webpage as Markdown with Save
- Open Notion
- Import → Markdown from the sidebar
- Adjust formatting if needed
Notion handles most Markdown well, but complex formatting may need tweaking.
Feature Comparison
| Feature | Obsidian | Notion |
|---|---|---|
| Data Storage | Local files | Cloud |
| Offline Access | Full | Limited |
| Collaboration | Via sync services | Native |
| Databases | Via plugins | Native |
| Linking | [[wikilinks]] | Native links |
| Graph View | Built-in | Not available |
| Price | Free (sync $8/mo) | Free (teams $10/mo) |
| Markdown Native | Yes | Import/Export |
| Plugins | 1000+ community | Limited |
Who Should Use Obsidian
Choose Obsidian if you:
- Value data ownership — your files, your control
- Work offline frequently — planes, remote areas, focus time
- Are a developer — comfortable with files and folders
- Want customization — plugins for everything
- Think in connections — graph view reveals patterns
- Plan for the long term — files work forever
Obsidian Strengths
- Speed — instant search and loading
- Privacy — nothing leaves your device
- Flexibility — make it work your way
- Portability — switch tools anytime
Who Should Use Notion
Choose Notion if you:
- Collaborate with teams — real-time editing is essential
- Need databases — project management, CRMs, tracking
- Prefer visual organization — boards, galleries, calendars
- Want turnkey solution — works out of the box
- Manage projects — tasks, timelines, dependencies
Notion Strengths
- Collaboration — best-in-class team features
- Databases — powerful relational structures
- Templates — extensive gallery of starting points
- AI features — summarization, writing assistance built-in
The Hybrid Approach
Many power users use both:
- Obsidian for personal knowledge, research, and writing
- Notion for team projects, shared databases, and collaboration
Web content saved as Markdown can go to either system depending on the use case.
Importing Web Content Workflows
Research Workflow (Obsidian)
- Find valuable article online
- Save as Markdown with Save extension
- Move to
~/vault/sources/folder - Open in Obsidian
- Add
[[wikilinks]]to connect ideas - Write your own notes linking to the source
Project Workflow (Notion)
- Find relevant documentation or article
- Save as Markdown with Save extension
- Import to Notion project page
- Add to project database
- Share with team members
- Reference in project discussions
Migration Between Tools
Obsidian to Notion
Relatively straightforward:
- Select Markdown files to migrate
- Import to Notion
- Reorganize into databases/pages
- Fix any formatting issues
You lose: wikilinks (need to recreate), graph connections, plugins
Notion to Obsidian
More complex:
- Export from Notion as Markdown
- Clean up Notion-specific formatting
- Move files to Obsidian vault
- Recreate links as wikilinks
- Rebuild organization
You lose: databases (become flat files), real-time collaboration, embedded views
Performance Comparison
Obsidian
- Startup: Instant
- Search: Instant (indexed locally)
- Large vaults: Handles 10,000+ notes
- Resource usage: Low
Notion
- Startup: 2-5 seconds
- Search: Fast but requires network
- Large workspaces: Can slow down
- Resource usage: Higher (Electron app)
Privacy and Security
Obsidian
- Files stay on your device
- End-to-end encryption available with Obsidian Sync
- Audit exactly what you share
- No company has access to your notes
Notion
- All data stored on Notion servers
- SOC 2 Type 2 certified
- Enterprise security features available
- Company can technically access your data
My Recommendation
For individual knowledge workers: Start with Obsidian. The Markdown-native approach means your saved web content integrates perfectly, and you’ll never worry about data portability.
For teams and project management: Use Notion for shared work, but consider Obsidian for personal notes that feed into team projects.
For maximum flexibility: Use both. Save web content as Markdown (it works with either), then import where it makes sense for each use case.
Get Started
Whatever tool you choose, the first step is capturing great content from the web.
Install Save from the Chrome Web Store — save any webpage as clean Markdown for Obsidian, Notion, or any other tool.
Have questions? Reach out at [email protected]